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HMGP 7620 (CPBS 7620, and BMGN 7620) lectures will introduce graduate students (and interested postdocs and faculty) to the field of genomics.
First class is January 25. Lectures (2 units) are TuTh 10:45-11:45 (aim for 1 hour, time for post-lecture discussions afterwards). Optional workshop (1 unit) is W 3-5, Ed II North, room 2201 AB. See FAQ for more info. |
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Lecture abstracts, background material, exam information, and relevant web links will be linked as available on a separate page.
Tuesday |
Wednesday |
Thursday |
January 25 |
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January 27 |
Pollock/Johnston |
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Johnston |
Organize Class, Overview of Genomics |
No workshop |
Mapping, Sequencing, Assembly & Annotation |
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February 1 |
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February 3 |
Johnston |
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Johnston |
Mapping, Sequencing, Assembly & Annotation |
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Mapping, Sequencing, Assembly & Annotation |
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February 8 |
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February 10 |
Sikela |
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Castoe |
The Human Genome |
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History of Life & Comparative Vertebrate Genomics |
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February 15 |
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February 17 |
Castoe |
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Shaikh |
History of Life & Comparative Vertebrate Genomics |
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Genome Architecture, Segmental Duplication and Genomic Rearrangement |
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Februrary 22 |
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February 24 |
Sikela |
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Martin |
Human Genome Evolution and Structural Variation |
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March 1 |
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March 3 |
Pollock |
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de Koning |
Population Genetics |
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Population Genetics and Molecular Evolution |
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March 8 |
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March 10 |
Pollock |
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de Koning |
Population Genetics |
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Molecular Evolution Applied |
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Spring Break March 14-18 |
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March 22 |
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March 24 |
de Koning |
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MIDTERM |
Molecular Evolution and Phylogenetics |
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March 29 |
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March 31 |
Spritz |
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Spritz |
SNPs, Haplotypes, Linkage Disequilibrium and Targetted Sequencing |
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Genome-Wide Association Studies |
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April 5 |
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April 7 |
Taylor |
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Sikela |
Pharmacogenomics |
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Personal Genomics |
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April 12 |
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April 14 |
Guest: Barak Cohen, Wash U |
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Students |
Gene Expression Profiling and Microarrays |
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Be Free, People |
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April 19 |
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April 21 |
Davis |
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Davis |
RNA Genomics |
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RNA Genomics |
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April 26 |
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April 28 |
Guest: Rob Mitra |
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Harris |
Epigenomics |
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Metagenomics |
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May 3 |
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May 5 |
Yokoyama |
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Hesselberth |
Functional Genomics: Transcription Factors and Binding Sites |
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Functional Genomics: yeast/models |
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May 10 |
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May 12 |
Hesselberth |
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Hansen |
Functional Genomics: yeast/models |
no workshop |
Proteomics |
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Week of May 16: is now available Friday, May 13. |
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