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HMGP 7620 (CPBS 7792, and BMGN 7620) lectures will introduce graduate students (and interested postdocs and faculty) to the field of genomics.
First class is January 26, last is May 13. Lectures (2 units) are TuTh 1:15-2:15 (aim for 1 hour, time for post-lecture discussions afterwards). Optional workshop (1 unit) is W 1-3, Ed II North, room 2201 AB. See FAQ for more info. |
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Lecture abstracts, background material, exam information, and relevant web links will be linked as available on a separate page.
Tuesday |
Wednesday |
Thursday |
January 26 |
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January 28 |
Pollock/Johnston |
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Pollock |
Organize Class, Overview of Genomics |
No workshop |
Continued overview of Genomics, History of Life |
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February 2 |
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February 4 |
Johnston |
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Johnston |
Mapping and Sequencing I |
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Mapping and Sequencing II |
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February 9 |
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February 11 |
Hunter |
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Sikela |
Sequence Search and Databases |
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The Human Genome |
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February 16 |
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February 18 |
Pollock and Castoe |
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Pollock and Castoe |
Comparative Vertebrate Genomics |
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Genome Annotation and Assembly |
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Februrary 23 |
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February 25 |
Martin |
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Shaikh |
Transposable Elements |
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Genome Architecture, Segmental Duplication and Rearrangement |
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March 2 |
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March 4 |
Geraci and Phang |
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Geraci and Phang |
Transcriptomics I |
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Transcriptomics II |
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March 9 |
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March 11 |
Kechris |
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Davis |
Transcription Factor Binding |
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High Throughput RNA Sequencing |
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Spring Break March 15-19 |
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March 23 |
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March 25 |
Hansen |
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MIDTERM |
Proteomics |
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March 30 |
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April 1 |
Pollock |
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Spritz |
Molecular Evolution and Phylogenetic Trees |
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SNPs, Haplotypes, Linkage Disequilibrium and Targetted Sequencing |
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April 6 |
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April 8 |
Spritz |
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Taylor |
Genome-Wide Association Studies |
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Pharmacogenomics |
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April 13 |
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April 15 |
Harris |
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Schwartz |
Metagenomics |
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Epigenomics |
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April 20 |
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April 22 |
Janoff |
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Guest |
Immunogenomics |
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Epidemiology and Viral Genomics (subject to change) |
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April 27 |
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April 29 |
Sikela |
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Sikela |
Human Genome Evolution and Structural Variation I |
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Human Genome Evolution and Structural Variation II |
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May 4 |
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May 6 |
Sikela |
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Johnston/Hesselberth |
Human Genome Evolution and Structural Variation III |
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Functional Genomics I |
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May 11 |
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May 13 |
Johnston/Hesselberth |
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Pollock/Hunter |
Functional Genomics I |
no workshop |
Social Impact of Genomics; Conclusion |
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Week of May 17: FINAL |
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